YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	nas-24
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRVVHIIGA AFLLSSYAYC GLSRFNEHDI EGGDSYKRVK REFERLGSKW LGGTINYYYA  60
   61 DNNNSVKEKV KSAIAYIANH TCIKFNEDPT HWQRLKIFTS ELSHCRSTIG APGTRSGSAG 120
  121 ELSMETGWCA NIGSIVHEFS HSLGRYHEHT RPDRDNSLKV TSTDYEARPR PWGMTTMYGP 180
  181 FEHGSIMMYH SSNYGVGKME PYDMEYKNTM GSRRVTFYDM YKINQYYGCG CSTQLECKNG 240
  241 GYTSPSDCSR CNCPKGFFGK LCNERRQQDS YELKATYGRW QTQTISFNYK PEPVSDGFYS 300
  301 TFVYITGEAN STIEITMEGL ENVICTAGCT WNGVEIKSRE DSRITSPVMC CKDEPLYKKV 360
  361 FKSLHNPTII ELYSKETAPS TATFKYRFMN DKIVFG

Type	Start	End	Confidence
Signal Peptide	1	20	0.95
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	396	0.99