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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: bli-1
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKSYTLAGL AAIACLLLAI GAVISTVYIL NDISDFYSEA QEELVEFKDI ANNIWEEMVF  60
   61 ELTPEEMREA EDNDREKRSY EPEGPYQSET TTPSTTTSTA ATTTEAAEDE SGYDFVNDNG 120
  121 PPSSRPRKPE PPTMPRTIQG FRAPPPAATS TYRPPHGSNY DNYGREPASS RRPYPPQQPP 180
  181 STSAPHSSPN NRTSLYNPQP PPKTGYPTNP RVPYNPPQPN YTRQPTYPED NRAPYKPTRS 240
  241 PNTPPPRQPS GGYDSDGQTP PSSPRIYNTR RPNNHGPGYP EDQVPTAPPV PGQQRVPPTQ 300
  301 TRNPPNPTNT RQPSRPVPPT SDGHIEATTP YNPSAQYPTG KRGSHPGFGP QRPRPGTRPR 360
  361 GNPCDQCSAQ PNHCPSGPPG PRGRPGPPGF PGQDGPRGLR GLNGGYSGVQ PSSYDPVIGC 420
  421 VQCPIGPPGE RGPDGTPGVP GEDGIDGEQG VNGQDGQPGA PGAPGYHGMN GSPGTPGKPG 480
  481 LPGRNGQSCK SIPGPPGQPG VMGVPGRDGD PGTDGEHGQD GSPGIQGPPG RDGTSGPDGQ 540
  541 PGVSAPGAPG TDGGYCPCPK RSSKFDFNDA YNDDEKRGLE EHRPRGYDSE RAEEPRPRQT 600
  601 VRTNTYDENS GAEHQRRPNY EPSAEVAPPR QDRYEDEERV REPPPKRPPP PHRQTPHELY 660
  661 PEEQPYVRRP PPPQNRGNYE VERSREYVPE APRPRQGYEH SSGYGGDDRK EQPKYMESRP 720
  721 VDEPRYETDA PSRSRPLKKV EIIRHPERGY DRRQPSYEDS KPRQEEPRRY ETEAEPRYEE 780
  781 VPRKETHPPG FGRPKSEENP RETGRTYSEE AMPPVQQTEK YNGDKRKKNQ PEYEDISKPE 840
  841 EDKERAMEKH HKKPNKFQEK QWEEHRKSQE LRNSREHGGQ VPVETSVPMQ QVKPESSAEE 900
  901 KPVPPVHDNF QSSEKRAFSN ENPLPSEQIP YRRRNRFYRN HYYEKFLV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle