YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	nas-6
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLDHVLLLTY CLVSTVVRSQ PSADVFRSFA GYIPEDHRVT HHEWQNSGKF QGDIDGVDPN  60
   61 LLKLPEGPVL FNALKNKQLT WEGGVIPYEM DTAFSPNEIK ILEKAFDSYR RTTCIRFEKR 120
  121 EGQTDYLNIV KGYGCYSQVG RTGGKQEISL GRGCFFHEII VHELMHSVGF WHEHSRADRD 180
  181 DHIKINWDNI LPGMKSQFDK ISAVLQDLQG ENYDYKSIMH YDSTAFSRNG RNTIETVENG 240
  241 FTQVIGTAMD LSPLDIVKIN KLYSCKTKKK EKVKPATTEE PHQLIPQVVD KNSVDSGEKC 300
  301 VDHFADCPHF AQYCTRASFF FVMKSYCPFT CKHCPGDRKL KKSG

Type	Start	End	Confidence
Signal Peptide	1	19	0.96
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	344	0.99