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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gar-3
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSSSLGNAD DPRFRQTHLF QMLVKVINTS AENATKTAIA TSSTSTPSFV DTYSTSSLLG  60
   61 EEGRMVMIVV IGAMFALVTS LGNLMVMVSF KIDKQLQTIS NYFLFSLAVA DIAIGVISIP 120
  121 MFTYYTAIQK WDLGYTMCQF WLCIDYLMSN ASVLNLLLIS FDRYFSVTRP LSYRPRRTTK 180
  181 KALTMIACTY IISLILWPPW IISWPYIEGK FTAEPGTCVV QFLQTNPYVT VGTAVAAFYL 240
  241 PVTIMCILYT RVYWETQKRQ KEFGKLQATQ TWASDVVDRP STQSFRNSKM WKKVKKFSRR 300
  301 SMKRDVSSTS IIKSSGSMRK KNNQDGYVED SVTPCTSSRN SKRKSWLRNC TGKSNSSSED 360
  361 SSEAVAMNLD DTSLSSSHFA LSGSRRRNIS PPCTPMPTNF EDEEQTDAGA SMRNGSARFR 420
  421 SRPSDTGKNN NSDTYTVLIE LNDEGSRPSV RLSSCEPYLD EPISTRNRSK SDCNSEIDER 480
  481 RHSLLNKQSP FKNGRILKNF SSQERKSEKE QRKNERKQES KAAKTLSAIL CAFIATWTPY 540
  541 NLIVCWEAFF PNTVPNVLWT FSYFLCYINS TINPLCYALC NARFRHTYMR ILRCKFKAER 600
  601 PTMNQGYVRR N

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle