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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: cut-6
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.95
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPIPYDISL SITSFLSLIL ICSANPIDNG LVDSELIHEC VTHKAVEVIL LLDASGSIGD  60
   61 DTFKKQLSFA MHLASRLNIS EDGSHMALIQ YAETPKLEFS LGQFNHPTQL EWAIQRIEYQ 120
  121 SGATNTGQAL RLTLEKGLQG ARPGIPKVAI VITDGQSQDD VSEPSQLLRD ADVMVYAIGV 180
  181 TNLVNVHQLH QMTGNPVRVF TVESFEQLDR ALADSLTWSM CKTEFRPGTP EIICGPDRIG 240
  241 VKASTKQPFE GNVFVMDHYH DEECRAGPEK FPDSRSIGLT VPFSACNVHR YRSLNPKGIF 300
  301 VEVSIVFMFH SLFMTKTDQT VKVQCFYMEA DKHVTVPLSV SMITTVFREQ IYQMPQCAYT 360
  361 LRKGAPDGPI VRFATLGESV YHRWECIEVE GADKDTFGML VHSCYVDNGY GDRVDILDSN 420
  421 GCGLDAVLLS TPDYDTSLRL ATKPYHVFKY ADRPVLQFQC QITLCLKYDG GCEGITPPQN 480
  481 CKKLPGEDGH HHHHHPEKRR KLVRRLADGV GTIDVFTDSV TVLEQEPACQ QPLPYPLINT 540
  541 NLWIMGIITL TNIFVFILTV WFTFRKRRCK PA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle