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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: egl-15
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.93
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYFLASCLG VGLLSTVSCS LQGLTSHYRE NIPRFKHVAN ERYEVFLGDE IKFDCQTAAS  60
   61 KISAFVEWYR NDKLLKNDQI DKDKIRKDNN RMMLHLKNID VSDQGLWSCR VHNAYGQISR 120
  121 NFTVEVIDPL KLFDWLTEHR VFDISHLLPK LLPPAEMRRV KSQLGGWEKM NNEQKIVRAR 180
  181 HILRLRQINH ALGTEFINAD EKENKEDEEE DYSVSQPVAP DAGLTELNIT AEEPPYFKSN 240
  241 DNIVLFNETH ALPAGRTLKL NCRAKGYPEP QIIWYKNGKM LKKSSARSGG YEFKFNRWSL 300
  301 EVEDAVVADS GEFHCEALNK VGSAKKYFHV IIVNRMRRPP IIVPNILANQ SVNINDTATF 360
  361 HCKVVSDLLP HIIWVRINKI NGSYSYYNNS AEEYMFNYTE MDTFDKAHVH HVGDESTLTI 420
  421 FNVSLDDQGI YACLSGNSLG MSMANATLTV NEFMAIHLLT GDEPKIDRWT TSDYIFTTIL 480
  481 LFLLLAATLF GILFMVCKQT LHKKGFMDDT VGLVARKKRV VVSKRPMNED NENSDDEPSP 540
  541 YQIQIIETPI TKKEAARKQR KRMNSENTVL SEYEVDSDPV WEVERSKLSL VHMLGEGAFG 600
  601 EVWKATYKET ENNEIAVAVK KLKMSAHEKE LIDLVSEMET FKVIGEHENV LRLIGCCTGA 660
  661 GPLYVVVELC KHGNLRDFLR AHRPKEEKAK KSSQELTDYL EPRKASDKDD IELIPNLTQR 720
  721 HLVQFAWQVA QGMNFLASKK IIHRDLAARN VLVGDGHVLK ISDFGLSRDV HCNDYYRKRG 780
  781 NGRLPIKWMA LEALDSNVYT VESDVWSYGV LLWEIMTLGG TPYPTIAMPE LYANLKEGYR 840
  841 MEPPHLCPQE VYHLMCSCWR EKLEERPSFK TIVDYLDWML TMTNETIEGS QEFNDQFFSE 900
  901 RSTASGPVSP MESFQKKRKH RPLSAPVNLP SEPQHTICDD YESNFSVEPP NDPNHLYCND 960
  961 NMLKNHIITP ETSQRIPSNN NSMSKPEF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle