YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE35607
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRFSGKSVI VTGSSSGIGR ATAVLFAKYG AQVTITGRDA GKLEATKKKM LKVMKNPENV  60
   61 CVVVANLTDS DGQDEIVQSA LDAFGRIDVL VNNAGANVVD GTFNTDQSTE LYHKTFQINF 120
  121 EAVIEMVKKT KNHLIESKGE IVNVSSVAAG PQALAPSPYY AASKAALDQY TRCVALDLIL 180
  181 QGVRVNSVSP GVVTSGFLGA MGMSEQVQKQ IEENFTSNRA CIPAGVCGKP EDIAELIIFL 240
  241 ADRKRSSYII GQSIVADGGT SLVSGLTAQN IQRNN

Type	Start	End	Confidence
Signal Peptide	1	23	0.72
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	275	0.97