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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE35506
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSPPISPYH VDFRAGSSKE SLSPSTPSPM YPKCNFRYND SRTQMIIEVP MAQLKKFQKA  60
   61 EGTISVKRET QHFCETTTMH GPKRIFKGKR IFTKLFWLIM VLGSLGLLIY QCWILSASYL 120
  121 SKPIVSQVSF LIPEDGMEFP SVTVCNFTPI RKSYIEAMNR TGDVSPDMIN YLMNWFTEIP 180
  181 ILLGNTDQQS LNKGNEELRE YQSIHPNFTV DQFFMDASFD CSDLMKLCSF QGESFDCCSL 240
  241 ASPTLTPVGK CFTLDLSKSP MNKQTEPGIR AGLSLTLDAN LDEQFDSSTG IDALLPNSFV 300
  301 NGFRYFVHPK DTIPNLASDE YTVSPNSVAY SAISKFRYVL LPPNDWGNCT EDYPYGIQSN 360
  361 LSYTSGNCLS LCKAKYFMNQ CGCTPALYNI GNNFQECTPF ETYNCVNNSL SLLNEETGKM 420
  421 EFQPPSCTRC GQQCDSQVYR ADNSNGNQFS AGAFNYFNSK NSSWSVDYMK SNFQMIRIFY 480
  481 RDMSYTEYNQ VQDASITDLL SAIGGNMGMF LGGSVITIVE LFLFFSKVFW IGFSKTRRNY 540
  541 LYSKRANEKA HKKEVVETVE KMKVIASQGN LTSLSDATCA TPPLKLSSPN KKVEFRINFE 600
  601 DLASQLDFDS SECKGKSEKS SNLQKY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle