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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE35493
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANQKNRGKN QKKKKSWKEV SLEIRKNEKF WVVLRILNGI IVVGLFTLYT FHFHSKSRVT  60
   61 PQFCESPQCI ILAQELKAYS DTATKSCEDF YKATCENYKD HQALDRHRDC KKRKAVNKLV 120
  121 RGFLQRDEST FTSESESAIK LIFGKCDELS RNTSYLDIFK DIKKIGSWPV LEHNWKDSMF 180
  181 NLDDVIAKLV KLGSTDFGLF KLELRKLAFG HFAVFVSSKQ EQNIHQLEKT ILGILKANGI 240
  241 QQDRKELSDD LKDYSDFKNH LKEFYQEETY IEYRLYAGSI VENLGISSLT TQMALKSTGL 300
  301 DVFNHVNQRT LITNSSLFFG EENNLGMIIQ KTPKRTLANF LIFHFIDVMT TDLANATKAC 360
  361 KETLIDLLPR ASIQVLSRNF VNEDAQDDMV KMAQDLKTKI TEMIDNSPFF TKFHLVFDAE 420
  421 EQKKLIQKVK AIGIVTEYPQ EVLDRDFERL NLTPSDSIYR TIQKLRRLRS EQLIEHLGGD 480
  481 LDPTDTRVWG SAHYDQTTNN LTIFAPIIDG PYFDTSYPNY VNQFLMGFIL GRELGRSLDS 540
  541 VRIRKDEKGQ TENWLKPESL KRFDEHLKCW AEKYDKSADP LKSESKGIRQ IEGRYIQNEM 600
  601 FADFIGHEAS WRAFMKLDVK NEEVLETFKV IKLRRMFFNV QALYFCRPPS GSTDWLSYQE 660
  661 HHQHYSFRVN GAFKNMPQFA LAFECASDDD MNPQNKCSMF 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle