YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE35492
Protein type:	Transmembrane
Type Confidence:	0.81
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVEKMREKF SSPWIALNLL LLMVFLALVT VHIKMTVEVK PVKLDELLSN AADSRNLCES  60
   61 PDCITLSHEL LNYQDPSVDP CVDFFQHACG RFHEQSSVES RTQKKRYILQ KQIREFLHNN 120
  121 KTSTSKSENL MKLVFDKCEA LQKSQNTGYL QEVHEVFNDI KKIGAWPLLD KNWDESKFDL 180
  181 NEMLTNLVKL GATNFGLFQF NFLGLIMGNF VEIAPTEKSD VEEIQMVLDI LKGNGIEPDR 240
  241 EEISRELEEY SMLEKKLKIV KENETISLNL ILPDVRSVNF SGLIAEMSHP SRVSKLSGMI 300
  301 TPKIITNKHP LLFETNGTES LDAIIESTSN RTLANYLIFN YIQSSRDILT ETYENCEQKV 360
  361 EAIKVIIGYP DHFDPPGTLD KEFEHIDLDS TDSFYRISQK LHRLRTEQQM EFIAGETPIS 420
  421 PVENVLEVSA HYDPSKNALT FLAPFLDDPF FDTTYPDYAN LFLSGRIIAH EIGHSVDGTS 480
  481 L

Type	Start	End	Confidence
Cytoplasmic	1	13	0.70
Transmembrane Helix	14	33	0.76
Non-Cytoplasmic	34	481	0.98