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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gcy-7
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPFYSMSLV LFLVITLLPK PMFPQVATGT TGNVIRVGFI HCRDFQSAPI TVGYRTSAAA  60
   61 ASIAVDRLKR ENLMSGWEFN FTIEFDDCVE SEAAGMTVDL IEKHNVDVII GPTMNQPTLA 120
  121 AFIVSNYFNR PIIAWGLVNA AQLDDFERFP NAGILSAGQR SLGVAIRAVL KRYEWSQFVY 180
  181 AYFTEEDTEK CVTMRNDLQQ VVSYFGDIIL AYSIQVADIS NDGMIEALKK IQSRGRIIVT 240
  241 CMKDGIGLRR KWLLAAEEAG MIGDEYVYVF SDIKSKGYVV PLLGGGERPS WILSTGSDEN 300
  301 DTRALKAFKQ SIFICDMMGQ GSIATNYTIF GQEIIARMKE APYFCTKDCE GENFTVAATY 360
  361 AGQLHDAVYA YGVALDKMLK AGQIAQYRNA TAFMRYFPQS FIGMSGNVTI NEKGTRNPTL 420
  421 FLLALDENNN NTRMATIYVE NMSATFNALY SDEGVMWASR KNNARPVDVP LCGFTGNLCP 480
  481 KSFVDEYLIW VIVAIVVLFL AITAAACGIY FSIQARRQEI ERLNRLWQIP FIHLHQINSK 540
  541 QKGKGEHSVR SLQSGTSTLS SRTTVSFKTE SRNFLFFSLQ RESDYEPVVA KKHAYRPRLD 600
  601 DDKCTFMRSL RNLDQDNLNR FIGLCLDGPQ MLSVWRFCSR GSIADVILKA TIQMDNFFIY 660
  661 SLIKDMVHGL VFLHGSMVGY HGMLTSKCCL IDDRWQVKIS NYGLQDLRSP EMYEKKDLLW 720
  721 SAPELLRAED IKGSKEGDVY SLGIICAELI TRKGVFNMED RKEDPEEIIY LLKKGGLKSP 780
  781 RPDLEYDHTI EINPALLHLV RDCFTERPSE RPSIETVRSQ LRGMNSSRND NLMDHVFNML 840
  841 ESYASSLEEE VSERTKELVE EKKKSDVLLY RMLPKTVADK LKLGQTVEPE TFEQVTIFFS 900
  901 DVVQFTTLAS KCTPLQVVNL LNDLYTIFDG IIEKHDVYKV ETIGDGYLCV SGLPHRNGNE 960
  961 HVRQIALMSL AFLSSLQFFR VPHLPSERIN LRIGMNCGSV VAGVVGLTMP RFCLFGDAVN1020
 1021 TASRMESNGK RMDFGFPPFS DKLNI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle