YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE35239
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNSMRGPLL FILGVTFSGF LFSLHYTRNK DYKDTVAIPR LAIQTEQLQE TTRIASRVIS  60
   61 TSSTKTPHVA TPPPAAKVEP VDCNCISKTT GKSYNFCYTD PQNSTSIGKK FDCASLTILE 120
  121 KLNLVENPGP YVDLADSEKN SKNMVFVSAV SENHFNEATH SIGSVYKFYH NAKFILYSLG 180
  181 LNKFYTQTIK KQFSNLEVRV FNTSGYPNYT NHWMEYRFKP LILAEVMKDY ENIWWMDAHI 240
  241 SVKKPGMIEN LFKEISENTK KSVTKVPISI YYFIHSSHSN FATLFTDLLD YFPSNSIPLL 300
  301 KDPNLGGQMG ANTMFFSRTE YTIQTFKWWI LCALDKNCMN PPGAQVYCSF AIDDRNTKFA 360
  361 NCFRFDQSVI NLLMLNDFQD YKLYRSKIGS VF

Type	Start	End	Confidence
Signal Peptide	1	23	0.73
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	392	0.98