YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE35227
Protein type:	Globular with Signal Peptide
Type Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASGYRSLDG MHRLLTMISF FLLLENFAAR LDIDELILKV LSVGHPEKSL TKTVKEHELI  60
   61 QLCQMAKKSF LDQPVMLEVD APIKVCGDVH GQYSDVIRMF SIARFPPHSN YIFLGDYVDR 120
  121 GRQNLELITL FLCYKIKFYD RFYMLRGNHE CPAVNRVYGF YEECNKRYAS TRLWLAFQEA 180
  181 FAAMPFTGLI SGRILCMHGG LSPKLTNLDV LRDLTRPMDP PSPSLHIDLL WSDPDNSVID 240
  241 WLPNVRGVSY IFGPNVVKKQ IETLGIDLIA RAHQVVQDGY EFFAEKKLVT IFSAPHYCGQ 300
  301 FDNSAAIMNV DDNLICSFHV LRPSNRKAKQ PAN

Type	Start	End	Confidence
Signal Peptide	1	28	0.74
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	333	0.95