YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE34895
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSVGHQIFS LLSFTLFSHF IFGNPFLILH FSVPVKMALP SSEGLRKRKD SLSDEFDSDL  60
   61 DDNEMKAIVS DIEQDKLHDE TPDTRWIQFK NHLKNWGETA TIHGVPHMAQ AHTVIAIIVW 120
  121 SIILIVSAVA FVYMFYSIAA SYLAFNVVVN LNTGLDSEPF PSITFCNTNP YKLSEMVNVP 180
  181 ELNALLTVYQ ASADGSLS

Type	Start	End	Confidence
Cytoplasmic	1	7	0.53
Transmembrane Helix	8	31	0.81
Non-Cytoplasmic	32	112	0.53
Transmembrane Helix	113	136	0.89
Cytoplasmic	137	198	0.54