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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: col-111
Protein type: Globular with Signal Peptide
Type Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVDNAAIAT WTSVLVSVAC ISFCAFFAAS VCEDINQFLD DSLLSFKEGQ GRTDDAWNEV  60
   61 VFLNDKKFKS ELLVSNSATV RQKRSDLPAH CNCLSQNQCP PGPPGPPGPA GMDGKPGEPG 120
  121 ASGPHGMSGS ELTKMMRNDD TCIKCPAGPP GPRGAPGSVG EPGPQGRDGM GGRPGNMGRP 180
  181 GPPGPAGDPG QAGSKGAPGT HGRQGMPGVR YQLGEPGPAG YPGPRGAPGP VGPPGVAEEG 240
  241 PDGLPGPAGP PGKPGMPGPM GTPGGPGEPG IPGSDAAYCP CPKREALVES SVISQEVPET 300
  301 GYGDGGDKSK REKVVETHQE EQTYDSFKFE QV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle