YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	egl-5
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTSTSAFDF GSSTASSAAT STTSSQPDAN DHLSRLAAMT QGVGKEDPET SSTPSTEASL  60
   61 YPVSAAYMQS YGWPQNYNYF GQPLGPATFP GWPQCYPNTA WPNYGELFAS SKKGRQTYQR 120
  121 YQTSVLEAKF QQSSYVSKKQ REELRLQTQL TDRQIKIWFQ NRRMKAKKEK QRVDDHTEHT 180
  181 PLLPANPPKG MGMDMDDEKK WQMAHWPPAA AHNPYQYPLC PP

Type	Start	End	Confidence
Signal Peptide	1	25	0.74
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	222	0.99