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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE34455
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFFYSLFAP LIFLVTFIYN HVLLILFTVC IIGAAAFFVS YYLFGYSNTP SSASSSATPS  60
   61 SRNSPNKERS KKVPTILETD NEDDEIRVNG SPKSGTPTNT QTIEPPTSLN LNMVNSASGS 120
  121 NLSGARRMRK RDWAKKLYKS LVQDSPGRTP TDESSDEENA NVVMGGGSVP RRRSKHGNSS 180
  181 RRRQSTAFQL AKDLIRRGSR SYFRQNQENN KDTRVRPPQE FFEPTDLPEI PQNLQPEIFY 240
  241 ILHNLKMLEL PSEWKLDPRE IEVRSFQAGD YIVKPGESDD AIYVAIDGEL TVHIRHMEGK 300
  301 EYLVKCIPAG GSFFSLLSML DILMDFPSIF RTVALKAADP CRVAKFPITS FRESYHKNPE 360
  361 AWIRPIQIVI TRLLHVTLTT LHQYMGLSSE LMRRRRDDDR HRNGSSTSKL QLSLSLKKKE 420
  421 KPFNINDNEQ DQLIVARKWM AEAFGLVADD VVSEQIGSKI HLESYEAGHV IIEQGAEEEV 480
  481 LMMVLHGNLI LAQYGSDFFA QIERESLFDE ENNEEDESAV IRVTARELVG GLQILTNEPS 540
  541 FYTIRAAVQT RVAIMKKKDF SAFLEAHPEI YLPVAHSVLR RLSPFLRGVD FALDWVLVDS 600
  601 GHACYRAGDM ADSLFVVLSG RLRSVEKKTV VEEFGRGDVL GMMEVLTKKP RATTVLAVRF 660
  661 SQLARVPEGL LNFIKMQYPQ VGFRLVQLLG QYYSQTNRRA PFAAPTVIRT NELGATDPMS 720
  721 HIKNLHTIAV VPASPDVPLV PFTCELYHAL SSNLRVLRLS SQKVAACLDP SVLEKQADFR 780
  781 LMHWLNVQED TYPLVIYECD FTQTNWTRRC LRQADAILVV AIGGKTPEKQ TLMRELMNMN 840
  841 QDGVRTNKEL ILLWPESTKT PSGTIEWLKN SYFSGHHHIR APKRMLQWNR KFRKMSRAEV 900
  901 MTPTSVENEV IEYYEKNVFW TPDRRSDFSR LARILTGNAI GLVLGGGGAR GAAHVGVLRA 960
  961 LREEGIPVDI VGGTSIGSLI GGLYAETPDD VVVETRAASW FNGMSSLWRK LLDLTYAHSA1020
 1021 MFTGAQFNFS IKDLFEERLI EDLWISYFCI STDISTSEMR VHRSGPLWAY CRASMSLAGY1080
 1081 LPPLCDPQDG HLLLDGGYVN NVPADVMRNL GARCVIACDV GSIEETNLYD YGDSLSGMWV1140
 1141 LLKRLNPFGT PPRILNMEEI QSRLAYVSCV RQLEVVKKAS YCRYLRPPIE PFKTLDFPKF1200
 1201 QEIMELGLKY GREACHELIT NDRAGILGDE KETRKFKRQQ SRREKPDVSR AVSFTDLAAA1260
 1261 MSKIPVVRPT LRHSMSLNPS ANGPVGRAGD HFLLDDDLFN DTDYYEEESS QSENGNESFT1320
 1321 EDEDLVIGPP SSSSSGGNVS ENPRGTTPRP PSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle