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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE34454
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFFYSLFAP LIFLVTFIYN HVLLILFTVC IIGAAAFFVS YYLFGYSNTP SSASSSATPS  60
   61 SRNSPNKERS KKVPTILETD NEDDEIRVNG SPKSGTPTNT QTIEPPTSLN LNMVNSASGS 120
  121 NLSGARRMRK RDWAKKLYKS LVQDSPGRTP TDESSDEENA NVVMGGGSVP RRRSKHGNSS 180
  181 RRRQSTAFQL AKDLIRRGSR SYFRQNQENN KDTRVRPPQE FFEPTDLPEI PQNLQPEIFY 240
  241 ILHNLKMLEL PSEWKLDPRE IEVRSFQAGD YIVKPGESDD AIYVAIDGEL TVHIRHMEGK 300
  301 EYLVKCIPAG GSFFSLLSML DILMDFPSIF RTVALKAADP CRVAKFPITS FRESYHKNPE 360
  361 AWIRPIQIVI TRLLHVTLTT LHQYMGLSSE LMRRRRDDDR HRNGSSTSKL QLSLSLKKKE 420
  421 KPFNINDNEQ DQLIVARKWM AEAFGLVADD VVSEQIGSKI HLESYEAGHV IIEQGAEEEV 480
  481 LMMVLHGNLI LAQESLFDEE NNEEDESAVI RVTARELVGG LQILTNEPSF YTIRAAVQTR 540
  541 VAIMKKKDFS AFLEAHPEIY LPVAHSVLRR LSPFLRGVDF ALDWVLVDSG HACYRAGDMA 600
  601 DSLFVVLSGR LRSVEKKTVV EEFGRGDVLG MMEVLTKKPR ATTVLAVRFS QLARVPEGLL 660
  661 NFIKMQYPQV GFRLVQLLGQ YYSQTNRRAP FAAPTVIRTN ELGATDPMSH IKNLHTIAVV 720
  721 PASPDVPLVP FTCELYHALS SNLRVLRLSS QKVAACLDPS VLEKQADFRL MHWLNVQEDT 780
  781 YPLVIYECDF TQTNWTRRCL RQADAILVVA IGGKTPEKQT LMRELMNMNQ DGVRTNKELI 840
  841 LLWPESTKTP SGTIEWLKNS YFSGHHHIRA PKRMLQWNRK FRKMSRAEVM TPTSVENEVI 900
  901 EYYEKNVFWT PDRRSDFSRL ARILTGNAIG LVLGGGGARG AAHVGVLRAL REEGIPVDIV 960
  961 GGTSIGSLIG GLYAETPDDV VVETRAASWF NGMSSLWRKL LDLTYAHSAM FTGAQFNFSI1020
 1021 KDLFEERLIE DLWISYFCIS TDISTSEMRV HRSGPLWAYC RASMSLAGYL PPLCDPQDGH1080
 1081 LLLDGGYVNN VPADVMRNLG ARCVIACDVG SIEETNLYDY GDSLSGMWVL LKRLNPFGTP1140
 1141 PRILNMEEIQ SRLAYVSCVR QLEVVKKASY CRYLRPPIEP FKTLDFPKFQ EIMELGLKYG1200
 1201 REACHELITN DRAGILGDEK ETRKFKRQQS RREKPDVSRA VSFTDLAAAM SKIPVVRPTL1260
 1261 RHSMSLNPSA NGPVGRAGDH FLLDDDLFND TDYYEEESSQ SENGNESFTE DEDLVIGPPS1320
 1321 SSSSGGNVSE NPRGTTPRPP SS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle