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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE34451
Protein type: Globular with Signal Peptide
Type Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLLILNILF VVWQIHGVIG QSTNAAVVST TAAPVKPATY MLVAPAVVRP DQPFSVCMNL  60
   61 LKQATDEDMI VRIEVRTERN ETIAARVISN LKPGIAQTVS LSEMPAQSLT PRQSYKLYIR 120
  121 GETLNAELIF ENENELKYDQ KALSVFIQTD RAIYRPASLV RYRAIVVKSD LKPYVGNATI 180
  181 KIFDPSRNLI SQTIGVTLDR GVYSGELQLA EETLLGDWFI EVETSNGVQD KSSFTVDTYV 240
  241 LPKFEVNIKT SSFITINDDL SVFVDAKYTY GKGVAGKAKV SLELPWHRWH AMVPTIIDEN 300
  301 GVKKEEELMV ERTVKLNRQG EAAVVFSNDE LKRHKLLHEW GGGSIRIVAS VTEDITEIER 360
  361 NATHQISTFR EEVKLDVEKQ GDTFKPGLTY NVVVALKQMD DTPVKATLPK RVQVSTFYNY 420
  421 PYNHDTSSLQ EEKETKIVEV DAHGTSVLTL QPPINCTSAR IEAHYDIGGK DNFTATPIYS 480
  481 SLYVEAAVSP TKSFLQLLAD NEGAVDVGKS LSFSLKATQP LSTITYQVMS RSNIVVSQQM 540
  541 TVNSEHATIS FPATANMAPK SRLIVYAIIE SSQEVLVDAL DFKVEGIFQN QVALSIDKQA 600
  601 VEPGQNVKFK VTSDKNSFVG LLVVDQSVLL LKTGNDITRE KVEQDLENYD SNNVGGGFGG 660
  661 PRPWEAIDRK KRSIWRPWWG IGGSDAQSIF SNAGLVVLTD ALLYREPQRE FMSGTFMRRN 720
  721 KVMMMDGAPG MAEAAFAAPP MGGSSPPPPT VRKFFPHTWI WSDLNSTSGE VEMEIEAPDT 780
  781 ITSWVASTFA INEENGLGVA PTTSKLRVFR PFFIQLNLPY AVRRGEKFAL LVLVFNYMEK 840
  841 EQDVTVTLKY DKDSGYDLLK KDGTVVRRDE VGQQNVRIVS VAGGGTSKAV YFPIVPSSIG 900
  901 EIPVHISAIA SQGGDAVEMN LRVDPQGYKV DRNIPFVIDL NNNSSDFSKN LELIWPNDVV 960
  961 DGSQKARLDV IGDMMGPVLN NAHKLVQMPY GCGEQNMLNL VPNILVVKYL RATNRNESQL1020
 1021 ETKAIKFIEQ GIQRELTYKR ADNSFSAFGD SDKAGSTWLT AFVVRSFHHA KQYAFVDPNV1080
 1081 ISRAVAFLNS QQMESGAFAE RGEVHHKDMQ GGAQDGGVAL TAFVLISILE NGMENGKAVT1140
 1141 YLEKHLDEVS GNAYTMAVVA YALQLAKSKQ AGKAFENLKK HKIVEKSGDV KFASAQKKVE1200
 1201 KLKESRAYMF QARPVDIETT SYAVLSYLAQ NQTSESLSII RWLVSQRNEL GGFTSTQDTV1260
 1261 MALQALSSYA AVTYSDKHTS QVTILNGKHT HSFDINIRNA IVLQSYQLSS LNDAVSINAN1320
 1321 GTGVVFAQLS YSYYRDSLND DAPFFCSQEI KEIRAGNRLQ LDLCCNYTRP GKSNMALAEI1380
 1381 DALSGYRFDA EQVHTLTSIE DLQRVEMEKD DTKMNVYFNP LGGRPVCLSL YSDVTYQVAD1440
 1441 QKPANFRLVD YYDPEEQLKM TYAAKQTRSL QEKCGEDCWP PISPSLPPFD ESTVTGTSSG1500
 1501 FGAKWCALII AVLLIA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle