YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE34418
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVIVVNGDS DFDRKFSAGN GKAVFVDFTA SWCGPCQYIA PIFSDLANQY KGSVFLKVDV  60
   61 DECRGTAATY GVNAMPTFIA FVNGQKKATI QGADESGLRS MVAKYASTSA AWSGTGQRLS 120
  121 GSTTGSSSST SSSAPPRASG AAPPPAGPNP LEPVFRIIET INERLQGFGI SGVNFAGFQL 180
  181 QPFHLLLAIA LLIIFGPFGL LIALAVCFFT QPRGGGPAPG APRAGGSGAG GAPRPPPPAG 240
  241 PRAFGGSGQR LGGN

Type	Start	End	Confidence
Non-Cytoplasmic	1	184	0.56
Transmembrane Helix	185	209	0.90
Cytoplasmic	210	254	0.73