YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE34394
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYISENELK FLRLLERTKR LTKEDMSANV WKVSAATKIL NKMIYTLQND ETTNDILHEY  60
   61 RQEVLQLKLL AEAESKSSAE ERLKVIEKIP RVFPDVQVTV ADSKNDNEAE SYDFEKESAA 120
  121 GLRATQRSIY RSDLRKQLLS SNKHRAQDTS EDQEFMKNEL VEEELANSLA TMARSFKTMM 180
  181 SAAGDVIKED TERAILMAKE VDDNKTALGI QSERVERHAY KCGYDCFKVM LIVLIFMSFV 240
  241 SMVLMMKIFK KAST

Type	Start	End	Confidence
Cytoplasmic	1	225	0.71
Transmembrane Helix	226	249	0.83
Non-Cytoplasmic	250	254	0.73