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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: lam-1
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRPPFWLGL LLSLLLVFIE AQHPLQQNED RCQDRSCYPI TGNLLIGRKS QLKATSTCGS  60
   61 QGRQRFCIVS HLEEQTKCFY CDSRTEWKPQ REPYRLSHRI ENVVTEVMDD KNRNWYQSEN 120
  121 GAQNVSISFD LEAEFHFTHL IMTFKSFRPA AMIIERSADF GKTWQVYRYF AYDCDSSFPG 180
  181 IPEGPPKKHT DVICTSQYSD VAPSTGGEIV YKVISPHIVT ENPYADEIST LLKITNLRFN 240
  241 FTKLHTLGDD LLDYRPEIDE KYYYAIYEIV VRGSCSCYGH ASRCIPIDPH VSPNTVMERA 300
  301 DIVHGRCECM HNTEGLNCEK CKAFYNDLPW RPAIGDEKNE CRQCNCNRHA LRCHFDRAVY 360
  361 ESSGTNSSFS KSFFSKFSYF SGFVSGGVCD DCMHNTQGKN CEQCKPFFYR DPRRTIDDPH 420
  421 VCLPCECDKA GSQNKGICEG EEDAERGLVA GKCYCKTNVD GNRCDRCKNG YWNLTETNVD 480
  481 GCVACTCNLL GTYNNEGCDK YTGMCTCKRL VTGENCDQCL PEHYGLSEHV DGCKACDCDI 540
  541 GGSYDNTCEI TTGQCKCREG FSGRRCETAD SSFYCADITH YVYEAEYANL TRGEVKTREW 600
  601 PSQPHEQTFT GEGFAQAVEG TIITVNPIVE VSQKYNVIIR HDGARDPVGW ENIQITVVRP 660
  661 EAEGDGSCSD APPSDDFLIA RIYPGSRYIE VQPAICLEAG VQYELRIQFN EKRGNSHPQE 720
  721 RAAANILIDS ILLAPPTSEL HIFQGSARAE QHLTEYNRYQ CRHLALSLSL FKDQRNEVCE 780
  781 RYVCPIAAAL LNKTSECNCD ATGSVSGICN VQGGQCECKP NVVGRRCDQC AIGTYGFGPS 840
  841 GCKKCDCDAV GSLGNDCDKQ SGQCVCREKG IYGRQCNQCQ PGFWGFPECR TCQCNDHANI 900
  901 CDQSSGACIE CRDLTTGHYC DRCQDGYYGD PRLGVGIPCK PCPCPGGPTS GYQHADTCYL 960
  961 RNSGNNTQDI VCNCKSGYQG ERCGECAQNH WGSPREVGGT CERCDCNGNI DMAMEGSCDA1020
 1021 ATGECLKCLH HTEGAQCEHC VDGYYGDAKL KTCQRLVKES SGIHHYQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle