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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ptr-5
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEDRVEQHD KQPMSDSDPL NTEKEHVLET EEPERAVSAM DNRQEKLNCL HGFLSLRRMF  60
   61 YLVGYSVGRY PHAYLIVAFL ISINSLGMYR MVLKDRIRDG YTPTNAPSRY ETDVLREFYN 120
  121 ISGDPAMTIM ILMPKNGTSM HAKANLDEAE KLSKFFFNEF NASRDGRTLR FSQLCEPYCQ 180
  181 INKVFDLYKS AYDEQYKLFT TERRISKSSN LSYPLATMSG FDIHLERSLF GVELNPKTEE 240
  241 NTTKLTTSDM PPHRIITNMK HVEVIVFIFR GDRDSADKEK DLSRWELDAY EWSLNEHKSD 300
  301 IVEVQIVGTD VLDNEMMKDG RRLTPFFAAG FGFEITFVSL CVILTAVYHN CLDQGKLLIS 360
  361 LGAVLCPILA ITSTYGIVSI LGMRTNSFML VMPFLVMGIG VDSCFLMIHS WQKERRAQAS 420
  421 GTGNRLGMVY ESVGPSITIT SLTDFLSFAI GALAPTPETR LFCIASSIAL ALTYILQLVL 480
  481 FGPILAVATR YEHKTTTTSN CNWRKWLKAC WKKCINVYCK ILSNKFFAVV VMLGTAIYWY 540
  541 FAIYGLMTMK TRLDAVKILP KDSPLQRPNL VLTNLVWANY HPVTILINAP LDLENRHQMD 600
  601 RYWNMVDEFE KMHNCKGKAS TLSWLRDYIK FSYHGEPFNL FAFFGLMTPE VYEEVDPYQA 660
  661 NITTAKLPEF LKSPFFKHWD SFIHYHYEEG VIKLDRFMMN VAYDNTSSWD TRIQLMTDWR 720
  721 KVANNYSDLN VTVWEPNGMF VDQMLSLGRT ATQTGIWTLV CMAVVCAIFI PNPCSIITAT 780
  781 VSIASITTGV MGFLSLWSFD LDPVVMAAVL MSIGLSVDFI AHVAYHFQLA HRKEIRNGKI 840
  841 KKIPLKGSTE RLEHTLGAVA WPMIQAGVST ICCILPLLFR ASYSPSVFVA AIFLVVTFGM 900
  901 LHGLLILPTF LAALPESVTT ANCYRVFLSS SSERSCRYVP RRDSTNSIEL QKMERKDSLL 960
  961 N

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle