YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE34271
Protein type:	Globular with Signal Peptide
Type Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAFFRRFMS TTTVTAQPVL PWFRNVPLAP ADPILGVTEA FKKDTNPNKI NLGVGAYRDD  60
   61 QGKPFVLRAV REAEQQIIDA KMDKEYSTIT GVPEFAPLAA KLAFGDNSEV IRDGRVFTTQ 120
  121 SISGTGALRI GGQFVEKFIP SKTLFYPTPT WANHLPVFRN SGLSIQPYRY YNQETLGFDV 180
  181 EGALEDISKM PEGSVILLHA CAHNPTGVDP TKEQWKKLSQ VLKERKILPF FDMAYQGFAS 240
  241 GDVDDDAFAL RHFIEQGHNV LVAQSFAKNM GLYGERVGAF SIVCDSAEEA IRVGSQMRII 300
  301 IRPMISMPPL HGARIASRIL SNPELKKSWL EDVKLMADRI KSMRTALKDG LKAEGSTLNW 360
  361 DHITNQIGMF CFTGINEKQV QKLIKEHSVY LTNDGRISIS GINTGNVAYL AKALHDVTK

Type	Start	End	Confidence
Signal Peptide	1	21	0.57
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	419	0.99