YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE34233
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPTRRLLLR IISFFTFFAI FCLFYTQNPV KTLINATSST IKPPKTPKFY KILNWEKRES  60
   61 EKRLNNIEAL IRANSNKLPN RTSNLSAVQL CSKLRSPCLP ALKDFEGEIR TSPRYNLSTC 120
  121 VVQKSMSTVM TSMFCYLRDE KKFVGNHREL LKDWKIVRFC MFKNEFRNLG GVFKKFKIPP 180
  181 APNNWTHIMM VRHPFERFVS GFVDKCYRKP VIQKYCNGCG RNLTCFMETE LKRMGQQVES 240
  241 GKFQRTYEDR HFFPQSWRCN LHQYFSNFTF ILYSSSHNFS ITSQLFPIFR QHSVPQSSLD 300
  301 FIETSLSAGR TAHSTVDSKA TSFIEKRLNS SPYLMELLVK MFYHDFVLFN FTLPVI

Type	Start	End	Confidence
Cytoplasmic	1	6	0.82
Transmembrane Helix	7	27	0.78
Non-Cytoplasmic	28	356	0.98