YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: tat-5
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDSEIGIEG SDDVYLLPSV SSTSSSTFSM TRCCRSLFSR RRVLHSRTVR VGYGPVGHDA  60
   61 NVTFTPNTVC NQKYNIFSFV PIVLFQQFKF FLNLYFLLMA CSQFIPAIQI GAPITYWGPL 120
  121 GFVLTITLIR EAFDDFVRYL RDRDLNSEKY EKLTRDGTRI EIRSADIEVG DVIIMHKDRR 180
  181 VPADVVLLRT TDKSGACFIR TDQLDGETDW KLRIPVPHTQ HLPNEADIME LNCEVYAEKP 240
  241 QKDIHAFVGT LKITDDDNVQ DGSLNVENVL WANTVVASGT AVGIVVYTGR ETRSVMNTTL 300
  301 PESKVGLLDL EVNNLTKLLF CFVLVLSSVM VAMKGLDNLW YRYLMRFILL FSYIIPISLR 360
  361 VNLDMAKLFY SWQIGRDKHI PETVIRSSTI PEELGRISFL LSDKTGTLTK NEMHFKKIHL 420
  421 GTVAFSSDAF EEVGQHVRSA YAGRLAKHSF SAKLQNAVEA IALCHNVTPI FENGEISYQA 480
  481 ASPDEVALVK WTETVGVRLA SRDLHAMSLS VQLPNGQTLM KQFQILYVFP FTSETKRMGI 540
  541 IVKDETTDEV TLLMKGADTV MSGMVQYNDW LDEECSNMAR EGLRTLVVAR KPLSQAELEA 600
  601 FDRAYHAAKM SISDRSQNMA NVVNRMLERD LQLLCLTGVE DRLQDQVTTS LELLRNAGIK 660
  661 IWMLTGDKLE TAICIAKSSG LFSRSDNIHV FGNVHNRTDA HNELNNLRRK TDVALVMPGS 720
  721 ALNVCLQYYE AEVAELVCAC TAVVCCRCSP EQKAQIVQLL RKYRAPLRVA AIGDGGNDVS 780
  781 MIQAAHAGIG IDANEGKQAS LAADFSITQF SHVCRLLLVH GRFCYKRSCA LSQFVMHRGL 840
  841 IISTMQAIFS CVFYFASVSL YQGVLMVAYS TCYTMLPVFS LVVDRDVTAT NALTYPELYK 900
  901 ELGKGRSLSY KTFCIWVLIS LYQGAVIMYG ALLVFDADFI HVVSISFSAL IVTELIMVAM 960
  961 TVHTWHWAML LAQALSLGLY MISLILFDQY FDRQFVLSWV FISKTTAITA VSCLPLYIVK1020
 1021 ALRRKFSPPS YAKVN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle