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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: tat-5
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKRKKNDES SSSSSQKPCV SSSSDDFSVS FVRAEEDDVA TTIRDKTASL KSNATHFSAA  60
   61 SAAKGGMFDF RCCRSLFSRR RVLHSRTVRV GYGPVGHDAN VTFTPNTVCN QKYNIFSFVP 120
  121 IVLFQQFKFF LNLYFLLMAC SQFIPAIQIG APITYWGPLG FVLTITLIRE AFDDFVRYLR 180
  181 DRDLNSEKYE KLTRDGTRIE IRSADIEVGD VIIMHKDRRV PADVVLLRTT DKSGACFIRT 240
  241 DQLDGETDWK LRIPVPHTQH LPNEADIMEL NCEVYAEKPQ KDIHAFVGTL KITDDDNVQD 300
  301 GSLNVENVLW ANTVVASGTA VGIVVYTGRE TRSVMNTTLP ESKVGLLDLE VNNLTKLLFC 360
  361 FVLVLSSVMV AMKGLDNLWY RYLMRFILLF SYIIPISLRV NLDMAKLFYS WQIGRDKHIP 420
  421 ETVIRSSTIP EELGRISFLL SDKTGTLTKN EMHFKKIHLG TVAFSSDAFE EVGQHVRSAY 480
  481 AGRLAKHSFS AKLQNAVEAI ALCHNVTPIF ENGEISYQAA SPDEVALVKW TETVGVRLAS 540
  541 RDLHAMSLSV QLPNGQTLMK QFQILYVFPF TSETKRMGII VKDETTDEVT LLMKGADTVM 600
  601 SGMVQYNDWL DEECSNMARE GLRTLVVARK PLSQAELEAF DRAYHAAKMS ISDRSQNMAN 660
  661 VVNRMLERDL QLLCLTGVED RLQDQVTTSL ELLRNAGIKI WMLTGDKLET AICIAKSSGL 720
  721 FSRSDNIHVF GNVHNRTDAH NELNNLRRKT DVALVMPGSA LNVCLQYYEA EVAELVCACT 780
  781 AVVCCRCSPE QKAQIVQLLR KYRAPLRVAA IGDGGNDVSM IQAAHAGIGI DANEGKQASL 840
  841 AADFSITQFS HVCRLLLVHG RFCYKRSCAL SQFVMHRGLI ISTMQAIFSC VFYFASVSLY 900
  901 QGVLMVAYST CYTMLPVFSL VVDRDVTATN ALTYPELYKE LGKGRSLSYK TFCIWVLISL 960
  961 YQGAVIMYGA LLVFDADFIH VVSISFSALI VTELIMVAMT VHTWHWAMLL AQALSLGLYM1020
 1021 ISLILFDQYF DRQFVLSWVF ISKTTAITAV SCLPLYIVKA LRRKFSPPSY AKVN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle