YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE34170
Protein type:	Transmembrane
Type Confidence:	0.51
Topology Confidence:	0.45
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRHRYRVAAV LIIIVIICLL NYQIDKNLQK EHEEHKLALT NCMKSGRIFN SSVPETKDFG  60
   61 SSFTISFADI QKTHSWLYLP KFQNSMSSEI LMIVASRTDS FARRNVLRKT WMNPENSEII 120
  121 KDGRMKALFL VGMTDGDDSR MRKVVMEEAR IYGDMVVVDL KDTYEELPFK SLTTLLYGTS 180
  181 KASEFKLIGK IDEDIMFFPD KILPLLEQNL IDPSSESIYG MLFAEGGYVY RDKEHRWFVP 240
  241 DSTYGCDMFP PYTGGLFYLV TQDAAKKILN ATKHRIFIPI EDALINGILA NDCKIPRIHL 300
  301 PEIYGDHHSL TDEDTRGVLA WHTGKNDQQF LDYFYRKLSE SRLKKKILDE KNKHLFY

Type	Start	End	Confidence
Cytoplasmic	1	6	0.45
Transmembrane Helix	7	24	0.50
Non-Cytoplasmic	25	357	0.99