YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	hst-2
Protein type:	Globular with Signal Peptide
Type Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLWKKRKVLY FAGISVFILI LLLLKLNSKP KANVWPTSSK IVIYNRIPKT GSTTFTNAIA  60
   61 YDLYKENGFS VLHVNMTKNR QVMSLPDQYT FVNNITTWTE RLPAFYHGHV AFIDFQRFGI 120
  121 ANPIYINIIR EPLERLLSHY YFLRYGDNYR IGLKRSRAGN NETFDECYSR GGKDCDMKQM 180
  181 WIQIPYFCGH YHFCTEVGNP EALRVAKQNV LEKYLLVGTT SRMRDMIALL EVTVPDFFKG 240
  241 ALGHFDSLDA NRAHLRYTKK KIPPNDQTLS MIRRDEVYKM EREFYDFINN LFDAVFKKAT 300
  301 NGISKADDLV KLPLQYHFEK IKPS

Type	Start	End	Confidence
Signal Peptide	1	28	0.68
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	324	0.98