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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: grd-1
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLLIFLLCY FLGSPHYSEA NKIKLKSSGR SADINHDSPC IWNKTQSWVH PYQSITVECC  60
   61 DEELSKLIHK TILDAGNNAK LGNLAKFIQR RSQLFYHMSF ETIVSRENFA ISTHYHGTHS 120
  121 CRVHDNNLYY LVYETPVQYD PFNMKTEDYL ASIDSADPLG STKPANLRGD FPDVREDSTA 180
  181 GEDLSVQPSI GNILQYPNKF AWPDPDEEVS KKIMLAEQDA IRSINELMES VTEISVMNSG 240
  241 AVVNSTDSLN ITEIELPNPT PIPRNFANLR EKDRLPENTH CDKERKDGNR CCDGRLASTM 300
  301 RDAMRQMATS PDFGQGKEGI IAAELQQKVQ QRFQKSYEII VSQSDFVIST YTAGDNFCKF 360
  361 DNKGFYILAY VSPKQYDIDE KEDEMKLAAT SNKDPLGANT TMFENEAPWH VALKLDTYGD 420
  421 RAGYPVGSHC TQARTGSKCC SLILFNAMKS GYDSHVATSN FDPYDIRNIS KAVQWSVEEI 480
  481 LQHSAEVIVS LDDFAYATYN NNSYTCKYRV DKYHILAYTT PNHDLDNYDE MATSIIDSEP 540
  541 EAQIVYPAVD RTANQIPFQN TPSPYWTTPV PIPTQVYMPM QYTQQPMQPM YNQQPFFNQQ 600
  601 PMFNQQPMYL QPAFNQAPLP YQYPAQPSQF NPFLASFRRF KRQIGRTPYP IHQNVYNDIG 660
  661 SAKPFNCPAD LSGLSGMACC DGGLQFEANK VIDQAKQEPD FDKHNTRNLA KLMTRAVQKR 720
  721 FGTTFESVVA EADFSWGTNK FNGRTCKIDS QGYNALTYQS SSKPPPPSDF IDIPNDPTLG 780
  781 GPTGSSGGGG GGGNGGSGGG GGGGGGGSGG SGGGGSNSNS GGGGGNGGGG NGGGGNGNGG 840
  841 GAGDGNGGAG AGNGNGAGAG NGNGAGAGNG NGAGAGNGNG AGAGNGNGAG AGDASAAAAA 900
  901 AQAQAAAAAQ AQAAAAAAAQ QAAAAAAAAN AQQAAAAAAA AANPLSALVA ATGACFSLDT 960
  961 WVTTPTGKKR MDQIDIGDYV LTADLEKTYF TPITLWIHRE PEKVQEFLTI MTEYGKTLRI1020
 1021 TSRHFMYRNK CGKSYPQYIK MLPHDGEAIF ASDLEVGDCV VVLYKGKYRQ QKIETITRSV1080
 1081 RTGIYSPLTN NGRIIVNDML ASCYSEIQQN TLQTTFFWAY DKLRSVLVEF FGDLYNNKIE1140
 1141 LPTGTTLSRD IISLIVPIQK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle