YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE34069
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFHNFHILSL SSYAYNLFFA SAGMLSSLVM FFKFGLYELF IFTLFSVLFI SFAWGKDIAM  60
   61 EGLSGYHNFF VMDGFKFGVI LFVFSEFMFF FCIFWTFFDA ALVPVHELGE TWSPFGMHLV 120
  121 NPFGVPLLNT IILLSSGVTV TWAHHSLLSN KSCTNSMILT CLLAAYFTGI QLMEYMEASF 180
  181 SIADGVFGSI FYLSTGFHGI HVLCGGLFLA FNFLRLLKNH FNYNHHLGLE FAILYWHFVD 240
  241 VVWLFLFVFV YWWSY

Type	Start	End	Confidence
Cytoplasmic	1	11	0.85
Transmembrane Helix	12	32	0.90
Non-Cytoplasmic	33	38	0.67
Transmembrane Helix	39	58	0.90
Cytoplasmic	59	76	0.87
Transmembrane Helix	77	98	0.93
Non-Cytoplasmic	99	121	0.88
Transmembrane Helix	122	143	0.91
Cytoplasmic	144	152	0.82
Transmembrane Helix	153	173	0.89
Non-Cytoplasmic	174	193	0.84
Transmembrane Helix	194	214	0.91
Cytoplasmic	215	232	0.85
Transmembrane Helix	233	253	0.93
Non-Cytoplasmic	254	255	0.88