YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE33877
Protein type:	Globular with Signal Peptide
Type Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHFLVYFSIF FTILGAQLVE SSKCSDCIAS GKHWCVTVNE CGFSPCLTSI SKALNCPELP  60
   61 DKAHAYDDTF VRTKILLTTA AAFNNNPQKC FKNSMPTMTL SKTFSVNCSE VGPQTDCFGF 120
  121 TSFDTTQKVV VMSFRGTQGA TQLTEEILDF FTGKKPFFND AGHIFTYFYD AFFFLWNGGL 180
  181 QQEIRRLKYQ YPEYELWVTG HSLGGAIASI AASYVVHSGL YTGDQVKLVT MGQPRTGDYD 240
  241 YAVWHDKTFP YSFRIVHHRD IVPHIPPQYG KDELFHHRTE VWYNNNMSST DPYLICAEAD 300
  301 GLYCSNRQLD SYPPDHLTYF DINMPDWGSQ GCPKM

Type	Start	End	Confidence
Signal Peptide	1	21	0.87
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	335	0.96