YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ugt-45
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVLVFLLLF VLPAASCYKI LVSVPKFGFS HMQTMGKLAD ILVEAGHDVT FLMPVDVPIP  60
   61 QNGTELAKVV LVPTTDAINE IMGHAMKSGA VANLWTHSAN SKQGIMWSTD MIGQVSYHNT 120
  121 KNLIDNKALV QQMKDEKFDI GITELFDFSG LAFFEVIGLK NVMGAHTTSV FEGTLMATGA 180
  181 PILPSFVPAS QTFTDDSGSI LSRLNNLYMT YWSYQFQNKI QSFAQKALDE HYEKGKAPKI 240
  241 WNLVSDITWF FVNSDPIFDF PKPLPQNIVE IAGISVPEIK PVGKEWDEIL SKRSKNVLVS 300
  301 FGSIASPTTM PEAVKKSIVD AFAAFPDVTF IWKYDDTESK LTAHLDNVHI VKWMPQNDLL 360
  361 ADKRISMFWT HGGMGSLMES AQKSVPLVVV PIFGDQMRNA QIAKRHGVAL IYDKMDLSNT 420
  421 KKLIGALKEV LENPEYKKSA ELLARILATE RFSPRQKIID TVEMAGRFGQ MPRWTSAGKE 480
  481 FSFLKYFNLD LVIIAVFIFF LSIVSTVLLI RHLLAKLGFS GDKEKSE

Type	Start	End	Confidence
Signal Peptide	1	17	0.99
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	490	0.99
Transmembrane Helix	491	510	0.96
Cytoplasmic	511	527	0.86