YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	pyp-1
Protein type:	Globular with Signal Peptide
Type Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLVLIAKRN KPLIAMMAAI LFTVAVFLAT RPLSETAVIL QSQAVKMSTG AGDSAVYEAV  60
   61 ERGSLYSLDY RVYIKGPQGI VSPWHDIPLF ANKDKRVYNM IVEIPRWTNA KMEMATKEPF 120
  121 SPIKQDEKKG VARFVHNIFP HKGYIWNYGA LPQTWEDPNH VVPDTGAKGD NDPIDVIEVG 180
  181 SKVAGRGAVL QVKVLGTLAL IDEGETDWKL VAIDVNDENA DKLNDIDDVE KVYPGLLAAS 240
  241 VEWFRNYKIP AGKPANEFAF NGEFKNREYA EKVIDETNEY WKTLIKEANP SLNTVSRVPE 300
  301 AVHQGTDEAA ATAIGATPEH GANAPLPGDV DKWHFVQG

Type	Start	End	Confidence
Signal Peptide	1	36	0.76
N-region	1	27
H-region	28	33
C-region	34	36
Cleavage Site	36	37
Non-Cytoplasmic	37	338	0.99