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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: immt-1
Protein type: Transmembrane
Type Confidence: 0.55
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRIASKRSV SQTLKRARQQ SNQAAAPPKP PVQPPKKSGG GKGLALVGAT VVGAGGVVGY  60
   61 AYVDPEFRHK VESTVPPVKQ VFDAVLGESS LQKTKQQIGD LKDAVVNAVP KKKEVLPPLE 120
  121 LAPLPPVLPR EPTHVDPVDV RKDVTPMIPK PSPDVVFAKN QQLEEKLKIA IHSAEGKVRL 180
  181 ATEAKLKTIN AINEHASILK QTVDDAKHAN WENVTSALQR AEAEARVDSG QEVDGRNYID 240
  241 NLRKIVNDGK RDSTTATNPL LLNAQETANK LSHQLDEINA LVNKSRQESA VLNQYKDLIE 300
  301 KSRQQFALEM KSILPNVDIH AKDKNLNEDE LNALIAHAHL KVDQLRCQLS DQQVREELHI 360
  361 SKALEEQRLA DERIASEKLS IEMSRVGRQN ELEIERALVE SRSSWEGELE NQLKRTASAH 420
  421 SEHLEQVIRT QRQLFEIEQN QKVEEAVLQE RNLHSKQVGA ALSRLEGIEE ALGSRVALDN 480
  481 ENRRAKQFWI ACHNLIDTLK HGNKAGNNID ERRLPLNESL NLLKEVNPED EFVNAIIDSF 540
  541 PKQATTVGTY TEQDLKNRFE QLYKIGRKTA SIDENGGTLG AYFWSYVKSL FLVDMPQQYG 600
  601 NLDAIDVNNT DNYEILSRAK QYVHNGDLDK AIRVVQLLKG QPAHLARDWI VDTRSYLESR 660
  661 LLAQLLVAHA AVSSIRSTY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle