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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: tat-2
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMNSGKTKFK RTSLDRFLNI LIVGIVLFLI AMCLICTILC AVWEYQTGRY FTIYLPWDDV  60
   61 VPSPEQRGGR QIALIAFLQF FSYIILLNTV VPISLYVSVE IIRFIHSLWI NYDTQMYYEN 120
  121 GEKSVPAKAH TTTLNEELGQ VQYVFSDKTG TLTRNIMTFN KCTINGISYG DIYDHKGEVI 180
  181 ETNDKTKSLD FSWNSASEPT FKFFDKNLVD ATKRQVPEID QFWRLLALCH TVMPERDKGQ 240
  241 LVYQAQSPDE HALTSAARNF GYVFRARTPQ SITIEVMGNE ETHELLAILD FNNDRKRMSV 300
  301 IVKGPDGKIR LYCKGADMMI MQRIHPSTSQ IMRTSTNTHL ADFANIGLRT LCLGYKDLDP 360
  361 AYFSDWDSRV KKASAAMQDR ESAVDALYEE IEKDLILIGA TAIEDKLQDG VPEAIARLSE 420
  421 ANIKIWVLTG DKTETAINIA YSCRLLTDET KEIVVVDGQT DTEVEVQLKD TRNTFEQILA 480
  481 LPSPLGGKPR IEIETIHEES EAISSARSMD RNIVTPDLKS AEMAEHESGG VALVINGDSL 540
  541 AFALGPRLER TFLEVACMCN AVICCRVTPL QKAQVVDLVK RNKKAVTLSI GDGANDVSMI 600
  601 KTAHIGVGIS GQEGMQAVLA SDYSIGQFKY LERLLLVHGR WSYIRMAKFL RYFFYKNFAF 660
  661 TLTNFWYSFF CGYSAQTVFD AVLIACYNLF FTALPVLAMG SLDQDVDDHY SLRYPKLYLP 720
  721 GQFNLFFNMR IFIYSVLHGM FSSLVIFFIP YGAFYNAAAA SGKDLDDYSA LAFTTFTALV 780
  781 VVVTGQIAFD TSYWTAISHF VIWGSLVLYF LVCFLLYEWL PVSWIVKTSS SISYGVAFRT 840
  841 MVTPHFWFSI LMVSVVLLLP VMLNRFFWLD THPSFADRLR IRKKMGKKPS AKDDKKTAFK 900
  901 RTAATRRSVR GSLRSGYAFS HSQGFGELIL KGKLFKNVEN LRGKNNSNAK IHPTSDDLQP 960
  961 MLISSVPDDS QGASSINAMH LPMGTRPQNV PHTLNVNTDD WSQSSDFRPA YAKEPSPLQG1020
 1021 TVIRGDGRSH RNHVYSRETQ VEEQPDVITR L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle