YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE33603
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTASPAAYLL LHLFLRLTAK TCWQCLQDGG QFCLDNNQCI VDVLTIETKC NRIVDLPINC  60
   61 PSVPALQYAY DDDFVRNTVL PVIAATGTDN PQKCLDNQLP SMKVYKRREA NCSSLFSDVT 120
  121 CSGYTGIDFD RKVIVLSVRG SHGDHQYYDL WKIGNFNGTV PFLNIGRVTK KFNDNFESLW 180
  181 YSGLGEDLQN LIDAYPDYQL WITGYSMGAS IALLTSAFIA QTGMSSPYNM KVILFGCPRC 240
  241 TDYDFAMWHS TNFPYSYHII HAHDYAPRLP FFDNIDNTTL YHPRSEVWYN NDMREGDSFV 300
  301 ICEQADQPFC SSQVQNLSNA DHAHYFNMDL YRWSADGCPK NKEDYRPIAE SAVKNGKTFS 360
  361 YDLLIVILGA EKCTTNLENT INGGQRYR

Type	Start	End	Confidence
Signal Peptide	1	19	0.86
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	388	0.92