YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE33578
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAENLRTEL LYLQSPMCAP EPEKLIHYLK IWVIWLQIST SKASKPEICL KAWKIDPLPQ  60
   61 NLGNLAPTLE FRLRSATSIP AKPELGYSYD LASFFLYATI FCQCIIGWLI GSIVNKTKIK 120
  121 KSKYSKEILS RFDYIKWLFM LIIVLNVLSF VLIEIQYDKR FQDGSLNLSY QTFVLAICTC 180
  181 IVCPFNITLS KRLVRLIKRV TQQQNSAPST NQYNLDTTNG NTIAKI

Type	Start	End	Confidence
Non-Cytoplasmic	1	93	0.95
Transmembrane Helix	94	114	0.94
Cytoplasmic	115	133	0.94
Transmembrane Helix	134	155	0.92
Non-Cytoplasmic	156	167	0.93
Transmembrane Helix	168	189	0.91
Cytoplasmic	190	226	0.98