YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	dhs-2
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGILYWILN LTVVESVFYL VVAFLLFLIG RHFIEKLQIN NLSKRAVFIT GCDSGFGRGL  60
   61 ALKCLEQGMP VFAGCLTEQG IESLSAEARK SIGNGRSLDA FLMDVTSDES VGEVAKRLEK 120
  121 KCEQYGGMCS ESYLFQHHMK SRALNACTFL VFCFFLTIQQ QTYLGRVVTV ASICARVGLP 180
  181 GLGPYSVSKY GVSAYCDVIR QELRPFGISV HVLEPGFFNT PLINREKIDV GFGKLSKFFF 240
  241 AIQLYIF

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.74
Transmembrane Helix	7	30	0.84
Cytoplasmic	31	142	0.75
Transmembrane Helix	143	158	0.55
Non-Cytoplasmic	159	247	0.65