YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE33383
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	7	0.83
Transmembrane Helix	8	27	0.90
Non-Cytoplasmic	28	40	0.74
Transmembrane Helix	41	62	0.77
Cytoplasmic	63	73	0.91
Transmembrane Helix	74	95	0.92
Non-Cytoplasmic	96	110	0.78
Transmembrane Helix	111	129	0.94
Cytoplasmic	130	143	0.84
Transmembrane Helix	144	161	0.93
Non-Cytoplasmic	162	171	0.75
Transmembrane Helix	172	193	0.95
Cytoplasmic	194	248	0.96
Transmembrane Helix	249	270	0.69
Non-Cytoplasmic	271	286	0.70
Transmembrane Helix	287	307	0.90
Cytoplasmic	308	316	0.80
Transmembrane Helix	317	339	0.83
Non-Cytoplasmic	340	352	0.73

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSSLLSIGL SQFGLSVLQT LFMFYYVKVY INQFHVNTKW FNIAQTLFMV WNAINDPLFG  60
   61 YLQEIRGSWL TNRLLVIKTL SPFLVGSFVF MWIPWNTEGS DLEGLHLVLS LFLYDAFFSA 120
  121 ISVAWGALFA DTTQNQSLIR VKALKYSQIA ILLSVFSIAV TEKLSNSLKN FPIFQGICFF 180
  181 VAILSFICLW WGGHFGKITN NRQEDKEQGD REVLIEKEQE KEKEHQLTFH ENVQNSIHLT 240
  241 KQILSQRQFL AIVITNFFHT ARSIAHMNFA SIITEILIPQ DILPSGSIRL SLFFMLLTLG 300
  301 PQIILIVNEK LIANAGAIRV ISVSYIVSFL SGFMIVASGN PYSIMLFMLI DW