YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE33333
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESSSINRWF EYESGHAWCE SAYKYQTLPY VAEFANTCTN LPIIVLPLVN IMLLRRYLHD  60
   61 VNGGLIFPQL LLTFNGLAST YYHATLNLFG QLVDELSLVW IITVFLVVYI PVMKWFPEKF 120
  121 SKRLTLVRWV VLIVTALVSG LCFLEPNLNA IALMLFSIPA AVVINYEGKQ SGIPDIESFP 180
  181 SRILALWGVA FSFWFADRLL CDFWLYLGTP YLHALFHLLA GLAGYTIFIM FSMIDIESRT 240
  241 KTHKYTAAVR YFPGKNGSIF SFPYISLKER SQ

Type	Start	End	Confidence
Cytoplasmic	1	60	0.65
Transmembrane Helix	61	84	0.82
Non-Cytoplasmic	85	95	0.85
Transmembrane Helix	96	116	0.91
Cytoplasmic	117	124	0.91
Transmembrane Helix	125	144	0.95
Non-Cytoplasmic	145	149	0.81
Transmembrane Helix	150	168	0.92
Cytoplasmic	169	178	0.90
Transmembrane Helix	179	201	0.80
Non-Cytoplasmic	202	212	0.80
Transmembrane Helix	213	234	0.92
Cytoplasmic	235	272	0.95