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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE33264
Protein type: Transmembrane
Type Confidence: 0.65
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSETQEQEAS GNGEPDLPTT IRVTLKTLDD REATVTIGLQ DTIQSLIDLG RREMNIQSGF  60
   61 QRVIAGGRVL NSTQTVQAAG ISDGQTVHLV DRGPSGENDR PNVMPDRVAG PRIINAIPGL 120
  121 PPPGFIFQSP AFARMIPGNV EIPTPPSQTQ HTVVHPIRVP GSIAGTPVLT SRVSEDCVLQ 180
  181 KAVPYRGTSN SPNRPQAASQ TVTFPSEPNV IQWTVNIADD LIFRPREHFE QVVRETINNI 240
  241 SFLSDSTRLG VSMKWNQNCT SLSVELPPVS PHIPSPALEK LDFLCLWTDH LSRFIDKLEE 300
  301 HDGLVAATRH VLEMVKTRQF DQNLSQQARN QRVEALDEIV KHLEYQWAEL SHMKDFERIR 360
  361 FRKNQTEEYR ALKIQEYPET PRNPHFYMRH ALDIDVIGVM REFRKQQRRF TRLEDLLDDL 420
  421 NEVGAVKFIR DHITTEVDYR YQALSMFYCY IQRMRHQISH MTHLTADLDV SFITPSFPQR 480
  481 ILPQYAFQSS DEQPLTIPVT HIFEPPRMLS DVGGRYNGDY PYLAYHPPSV HMEVVLQEPR 540
  541 RIAEPRPQIL ARPTPQQFVL TQEMNQGGSI NLMAATDPIS GLSLQDVLRA QQEQVENLFA 600
  601 QQPGIEGGRV RVTARPGRRF VATTGDAPSV PVETLPPPGS DQQPGTSRRF TTHRFNVQPD 660
  661 ARGAETETLA PFPVAIEPNE LQRIAKNIAS RYRAEALQRI ASSLTTRFNN ESWDTRIQNM 720
  721 PLCTLRECVA IALEMLTSAG NTVNESKDLM LALVRDEEVL VRAIAECIKS LFGRGEFPTH 780
  781 VARLIMPTNQ TASSRNDYES VDGVEESQSD EFDSMIVRVP SDISQPQSGD LRAIRERRQN 840
  841 RRQFLENRGR IPSTSSAPST SENPPGPSFN SEDAADIRAG RLPLGTRPNR RTVRETVHPA 900
  901 AAARAESPNH ISLTFTATTH TFAPAGFPLM MASSNVPSTS AGPPGWPIRQ VVSPTPTTRG 960
  961 LFEFDLSGSS DQPARSTPSP PAPTPRTTSA PATVQSSPTR QESMDIDSPN VQNPGHVESP1020
 1021 AAIAARQAAR VARARIDHLA ATFNGDLADS RRQSPFVTPG PTTPLNDPRR RTVRVTQHVK1080
 1081 PMVAIDPFMN CTNRHCEINR LATPTHMADG DRFTLQSLQP DQEFEARIQA LVPSIERRPI1140
 1141 QIHHEDEDYN YSIRRTQSGL LSFRNLEDFR PFVKTAIRSL LAHCIDADTL FTMNMNNISG1200
 1201 YQAANHTELL RMVKEHISRV PGSRATRNAS QNTTSVNQST ETSPREQMNR SPVQEAADPR1260
 1261 LAFSPFPPGI NLEQEVLIPG QIASLLTYLV DYMESSSNPR PPGIFGFLLE LTYGRLTRHD1320
 1321 FAQLARRTTA TNVASEFEAQ IRAHIRDNYL VGRTGLSNSE LHGIAENLAN NEQFFAIFMS1380
 1381 QNDQLPTSFP FGYDRNDFAE VVWAFRQIEI ALIKSFLTLS QLNLDSGNAV RFILQSVDSY1440
 1441 LYRNLIMFYR MCDRDVERMK IQMKRISDYF ATIRYESTDR PGINVFIDNW NRVMDYWSNR1500
 1501 YTDFSEENFD QFLLKVRAGT DWNDIVLNES RQLLPTIAST SSQPSTSSSS LNTVSTNNPS1560
 1561 LGRLIWTQIR RFFQENAITT AVARIMMTVW MWWHR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle