YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE32929
Protein type:	Globular with Signal Peptide
Type Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKFLSLVHL ERIWSTAMSL FARQLQSLTA SGIRTQQVRL ASTEVSFHTK PCKLHKLDNG  60
   61 PNTSVTLNRE DALKYYRDMQ VIRRMESAAG NLYKEKKIRG FCHLYSGQEA CAVGMKAAMT 120
  121 EGDAVITAYR CHGWTWLLGA TVTEVLAELT GRVAGNVHGK GGSMHMYTKN FYGGNGIVGA 180
  181 QQPLGAGVAL AMKYREQKNV CVTLYGDGAA NQGQLFEATN MAKLWDLPVL FVCENNGFGM 240
  241 GTTAERSSAS TEYYTRGDYV PGIWVDGMDI LAVREATKWA KEYCDSGKGP LMMEMATYRY 300
  301 HGHSMSDPGT SYRTREEIQE VRKTRDPITG FKDRIITSSL ATEEELKAID KEVRKEVDEA 360
  361 LKIATSDGVL PPEALYADIY HNTPAQEIRG ATIDETIVQP FKTSADVLKS IGRA

Type	Start	End	Confidence
Signal Peptide	1	30	0.75
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	414	0.99