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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE32926
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVLPLLHLF LISSLQIAPT ATSSPSQFPC PTRCQCYADN EQNQQVHLIC KWEQLNVTTL  60
   61 QLARPDLVRT LTIKCPYHSP KVSTPPHSLF QGFRNLDRLE LDRCLIDTVP EGLFAGLGQL 120
  121 YSLIVKNAKI TDFPREIFAH VPNLMTLDLS GNRLRIEPYS LRSLQNLIHL DVSDNDIGFL 180
  181 TNTLISLTKL KVITMNNNKI TNIDFRRFPE NLTDLSIRHN LVSTIHYVPA SARNLKRLDL 240
  241 AGNRMEFVGG LTTGAVNVLP AELKHVDLSN NKLTYLHDHA FEHLTNLILL DLKNNSLKEV 300
  301 KSSSFAGSKF QVKLFLSENP LLCHCNHKWL MDSSAKNISI GDLQTIECLN ILKPEKKMLL 360
  361 TLAHSRNQLL CKYSNMCEAD CECCQKKECE CRFECPPTCK CLRSADVSIV RTSQNIMVCD 420
  421 KLRWDKLGKF PSPLTQLHMN QTDWKIFETE KLKELSNLRA LKITNSKMTS VEMEKLTDLA 480
  481 NLTHLEITSS AITSIPETIT KLPSLTHLYL SDNPLDQLSS TSLNHLDGLK KIRLGGNFSR 540
  541 FACDCESPSD FQRWLMRRIN RAKIDDIDDL YCDLNGHGTV WMLEALPGTN ESVCLDPTEE 600
  601 TKQWMTFVEN AQKGIMERVY TSTESTTKSE KTMMTTTLKK SILDTMDELE GVKSTEKISN 660
  661 KVISTTTVPT TTPRYRKKYK NYDNEPHKFV NVLIFLLFLC VIILIISIGV TVYLKFWHPE 720
  721 ELLMKRRKKE RLRPEIQREE EPLQHLD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle