YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	stc-1
Protein type:	Globular with Signal Peptide
Type Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGATGSLLA GGIFILLLAG WLGQKYGLPP PPPKIAGIDL GTTYSSIGIY HAVTGETIIL  60
   61 PDDLGKKSVP SVVAFLPNGT VLIGTRATEQ QEHNPKRTIY DAKRFIGRNF EKNNKDFLSD 120
  121 QKRYPFKINL DSEGKAFFEI PLDSGTKNVY PEEIGSLIIG YLKSAAAKHL GVTLGQVVIS 180
  181 CPAEFNEKQR NFTAKAAEIA EMEVRRVISE PTAAALAYGL HKKQGVENVV VVDLGGGTLD 240
  241 VSVLWLQGGV FVTQAMAGNN RLGGQDFNDR VQKHLISKIA EKFGKTIDNK EDIQQIRMEV 300
  301 EKGKIRLTNV PSTTISLNLK TVGKWNYELT RDEFETLNGD LLKAIELPIT AALADANLDT 360
  361 ADVDEIVLVG GSTQVPAVRK IVGRFFKKSA NYGVDPELAV VTGASVQAGV IGGGWPLQVA 420
  421 AMELPAKRRK RHFFTEEQKE NEKDRTISEL

Type	Start	End	Confidence
Signal Peptide	1	23	0.90
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	450	0.98