YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE32837
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIAFLVGFI CGVLLLLGIL YIFIVDPWAP PTDQPQPPIE QFRPAQIPEE LRTFLKSGED  60
   61 GQGISKWESC NSISLLLHML FQEHKDTRAL RRWVHKRLQM EMNDITTRSA AGRLIQEIRI 120
  121 RELSLGTKFM TINSIRVESV EMADDKNTFD KIVFILDIDY SGGFETSIDV STIIAKKASL 180
  181 SVKITKLTGM VRVILSRQPY HHWTFSFVSQ PIFETDINSQ IQGHQLKRLI PIIKEAIRRS 240
  241 LQRKHVWPNY KIRYRPFFPN PIFQASPPIN SFTHIKMEGG IEVTVLQCSR LKNALLLDDK 300
  301 NKNYEVYCTV SIESRPIVQN EEQGHVVNVL LTFSRYDVSS PIGLVFDKNV AATGNNTNRA 360
  361 VKVCTVEDNS LADKAAFKPG DVLVAINNVP IRSERQATRF LQSTTGDLTV LVERSLDDID 420
  421 EEESKATALA ARRRHSVSNL ESSVIDTNTE SVASSIFGLD AHKFDKPPSV SVQRAESARV 480
  481 PQLLISQPSF DLRRTQSESH LDAKVIDAVL SSSADFGMEN SVEDEIKMLL VGDLNRSASA 540
  541 GHNLDPQLLG VVKREDKDKT LTQADASKGL ALIASQTGSV ASLSSMISNR TDTGTEDGGD 600
  601 DEEAHLDRKR SASTRKAKIQ ATFAAGKKKV LDLMPQKRKN TDASDLNGES IEIGADAGSL 660
  661 YDTDTNRDPS IGRSPMAVVG KRKESPSDEK KEKKRLKKKL SESPKIRRAA GSAQKDQSPM 720
  721 TTIKARTTKS VQFQKDVMWG QSLHFEFDSP PESTTRTVIR YLNVTVHAKE VKSAGTPTTS 780
  781 ATNVPNATPS TPDSIASSST NTDNSVPTNI SADSKPILLG SVSLFVPQLI DDCRLTLSNC 840
  841 HREVYQLKQP NTSSPPQTSP DDPMLAEFAR HAGYDPRLCF GDITLGFRYF PNGFPVDKAI 900
  901 NSGDESEDEL NRIHNSKDVA SPTRPFSPPA LSPASHDWKL WYGKNSTTCA MCRGKIWLRN 960
  961 ASSCSRCLVI CHNKCVVKAN SGGIACTPQQ HLTPPSNLQL HSDEHFEEIS ASELDHPSVT1020
 1021 PGDHQIDETR SLIMQSPSTP SSSIAGSLDT PEMSKRARFR KVTEKFSNWR KGGKKKDDDD1080
 1081 FIGRRETIDT DSCADTGSLQ SQDISNRDSP MASIQDVLSD VLPGLDGSPF ISGLYFQPGN1140
 1141 AYNEQTIRNA KMLGREIFCD LPSEQRVERI NSQIDRIQTA IRETKDNRLS VMQNGGDISE1200
 1201 SSAKFQGLDE RLQALAVVML HYCSALQDCQ SGRSTPAPPP DDDNQKREIT EEISSVNVDS1260
 1261 NNEEDSESVL DEDTVTGDVP VQHDHPLERP TKLDPSSDAV EAHS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle