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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ptp-3
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEDEEALLL KEFESSSEVE ETTTVEPTSD PFGDSISTIS CKYGIINNLE ALLNKVASGW  60
   61 KYHVSNTDNV KDAWFRLDNA TSRICGHIGA LVGPPTNVRV EATSNSTAVV QWDFESQKAD 120
  121 SFVVKYMHEP GNRMDTEKWK QLPVVSIDKE NPKRFAVVSD LNAHKPYAFC VLAVKNNRQG 180
  181 PCSDPPTVLE SVTPTYMVQN LRVLWKTSNS VQLTWEYNGP RNVGFYVNHT GRKDYVNHEL 240
  241 QEKTMSTPGF GQDVDEKHRE YLWTNLRPHM MYTIHVGVRT LPPGARKYWP QEVVTITDPT 300
  301 GPPFVDVPKL VDSSGTQPGQ QMIRLTPATE EYGPISHYWI ILVPANYSTE DVVNLDPIEL 360
  361 EKATAEKRAQ LARSLSVSPS KKLKRKASEV GDDSQSASYH PKEKRARRAT VPGAYVTARL 420
  421 SADRVKQQYR NNQPFIVGDS QLYDGFTNYP LEHNLHYRLM MRAFAKNDVR TKDSFEQRAP 480
  481 MSEKLSRMYS DSVLTEPFTI KSALRGASQK SSPWVGACIA FLVLFSIVGM LICWWLRCNK 540
  541 KSAGRHPRHG SITKVALTGN IMNGGGGIPG ETSKLLSTSN EYGRQIMNPY EQMNGNHHME 600
  601 SSMDLYPLPT SHSRSNGYAP VPVAIPSLPN NGNNMTTVSH PAVPIAELAN HIERLRMNNN 660
  661 AGFQSEFESI ETGQHFTWEH SSADMNKHKN RYANVAAYDH SRVVLSNVEG YPGMDYINAN 720
  721 YVDGYDKPRS YIATQGPLPE TFSDFWRMVW EEQSVTIVML TNLEERSRVK CDQYWPSRGT 780
  781 ATYGDIEVTL LESVHLAHYT MRTMRLKMVG EPEVREIKHL QYTAWPDHGV PDHPTPFLIF 840
  841 LKRVKTLNPN DAGPIISHCS AGIGRTGAFI VIDCMLERLR YDNTVDIYGC VTALRAQRSY 900
  901 MVQTEEQYIF IHDAVLDAVN SGSTEVPASR LHQHLHILSQ PSADQLSGID MEFRHLTTLK 960
  961 WTSNRCTVAN LPVNRPKNRM LSAVPYDSNR VIMRLLPGAD GSDYINASWI DGYKERGAYI1020
 1021 ATQAPTNETA ADFWRAIWEH NSPIIAMLVR TNERGQEQCS DYWPLETGVQ VGMLVVEPMA1080
 1081 EYDMKHYHLR EFRISDINTR EVRTVRQFHF MEWPDVGKPH TADHFLDFVT QVHNTYAQFG1140
 1141 CTGPITVHCC SGAGRTAVFI ALSIILDRMR AEHVVDVFTT VKLLRTERQN MIQEPEQYHF1200
 1201 LYLAAYEYLA AYDNFS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle