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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gcy-29
Protein type: Globular with Signal Peptide
Type Confidence: 0.25
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPNFWNFQF IFVIFCWIPI VVSDEKIVLK IGSISSRDNA KMLESILEMA KKKMTEQGVL  60
   61 GEKLDIQIIT VEGCGASFEG VAAAAELYHV QKVDAYFGPY CSKELSPVAT MASYWNIPIF 120
  121 AYTATSAEFA NTKVYKTLLR TSFQSLNSIS EATAAFMAHH NITKAAIVAN IGTDSFEKIQ 180
  181 SLEKALRSRG ITVARRVMFE EAASAQDLVD NGYMNELRDN ARVILPIFSS TRDLSTVFRN 240
  241 ATWLANMASP EFIYINPLIV ARNSEEPPVF YGKMAQKSIK AENPNTIQIY NSYGFSDDLL 300
  301 NEFLAIFDQN QRIYIDEKDL FNYVALYESF CVFAKLTEKY LHSLKEKPED GKIRIDGKAL 360
  361 WNMAIRTVSL INSTVTSKNC MDPVCIELVV SDVVTKFWSS PSGKLPDSEP ECGFREENCD 420
  421 YTQTIVIATA VVCIILTVFL GIWLRRACET SALDKMPWRV FRDDVQILDE EQVKSVVSLN 480
  481 SASTKMSQVE TKLIKNHAIV GVNTHAVYDL YEQRQNIRFT REDLILLTKM KQAVHDNINP 540
  541 FIGVSFNEKS ELLLLWKFCS RGTLQDVIYC EKFAMDEKFQ GAFVRDITMG LEYLHSSPIG 600
  601 YHGGLACWSV LIDKNWMLKL TDYAVCDPLK RWEKHGRINC KVDNEAEKQW QKMASLYVPP 660
  661 EIRTANEKNR LKRMDQKWQG QTILKRQQSD IYAFGVIIYE ILFRSLPYDE KVDLTELAQK 720
  721 AAEGDKIQKP SIQRNKKLNP DLIALLQDCW SDQPDMRPTI RRVRLATEIA LKTKGNLVDS 780
  781 MMRMMEEYAN NLEKLVGERT KLAEEANLRA ERLLFQLLPK HVAIELKAGR TVAPKMYDSA 840
  841 TVMFSDIVGF TKLCSASTPI EVVNLLNKLY SEFDTVISKH DCYKVETIGD AYMVVSGIPI 900
  901 ENGQRHVANI SAVTLGIMDL LKVFEVPHRR DYRLTIRLGF ASGQVSAAVV GLSSPRYCLF 960
  961 GETVNIAAVM ESSGEGGRVQ ITETSKILLE NEYPEFIIEI RGINKDVKQD DFVTYWLTGK1020
 1021 DEDYFKKKNN TFDF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle