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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: kqt-3
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTTSGYPNG SLRSSLDDSP QDPEESETFL LGMVTGDGLG KMFNARYRNI KEKKAAKMTY  60
   61 RAMIYNCLER PTGWKCFLYH FSVFLIVLIC LILSVLSTVE EHSHFAAELL YILEIVLVVF 120
  121 FSVEFIVRLW SAGCRSKYIG VYGRLKFVRK PITLIDLVVV ICSLFVICFG TEGQVFAASA 180
  181 MRGIRFLQIL RMLHVDRQGG TWRLLGSVVF IHRQELITTL YIGFLGLIFS SYFVYLAEKD 240
  241 HIGVDGRQAF TSYADALWWG VITMTTIGYG DVVPQTWLGR IVASCFSIFA ISFFALPAGI 300
  301 LGSGFALKVQ QKQRQKHFNR QIPAAATLIQ CLWRCHAAEK KVSATWNAHI DPLAHETKET 360
  361 HHWNGKKHAS SMDSNNLTRK RQLFKKQSSL VNTFRRKGSP STDVEMGELQ QERLLRHERN 420
  421 SDTDDEKRIY RVGADIEIDY ETEEPTTPTR PQGHISHVCE LTDAHRNAIR AIRRVKYFVA 480
  481 RRRFQQARKP YDVRDVIEQY SQGHLNMMVR IKELQRRLDQ TLGKPGQYDG KGSRKGHPVT 540
  541 IGSRLSRLEL QMSSLDRKVE SSNRTLNALY RLMADRNSLT ISPSPPALIS RPVSPAACLS 600
  601 PRDQLSPTSI SSQRSGSPGW Q

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle