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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE32724
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGSRSSSFQ QQSASQALLS SETTKITIEA DAKNRETIRK LLEAYEQEHN VFKAHGIKGA  60
   61 DRIFNEIENI LLLDLNIKIV TIYNNDKNSA AMIIAAFFGR RFALDNQPGN PTKYVEKDLL 120
  121 SECHHPLHTI MVMCYIAHVM QKKFLGKDSG YEDGEVYEKL KNELEDIACK IVSHLNSGES 180
  181 GADRVAIVLQ ADYKSEFGKD TKGKTNTTEK SEEKVGPYHD YLNRKFDQSR EIMAIAYKAK 240
  241 ARKFLSLRPC LHLMETRNKA VKTIKHTLNW VIIKVSKEIS FNFFQTFRLA YILMFAYMLC 300
  301 RYPFYSSYDS TSSLGFWEML PFLFVPAIFD DFKLKHGSNP FGFYFSSVQR YVRLKKLAFW 360
  361 RVCLVVPLLS LEAIRFVVFA GLPSKPRNFW SGGWVILPLM LELLYCSLFT IATISSLRFF 420
  421 HSIQSIGFFV HIFKKMMKTV GMFILIFCTF WFVLAVTHVS LSKKNTKNNR RTVFTTKDTL 480
  481 NMNLRQSKWI CCNLTKSTVN IFRIESKLYL PPPLSLIYIL LRCSTCMVLL IMWGIQKWLK 540
  541 KDAGRVTQFS EYIWKNIIEK MEGHPWGVVR KHTPSKRKDQ NDPNAQNAQN GKNDPNAQNA 600
  601 QSDPNAHNAQ NVQNAPNVQN ASNVQNSQNG QNDKNDPNAQ NSQNGQNRQN DPNVQNSQNA 660
  661 QNGQYAQNSK NGQNDPNAKN AQNGQNDPNA PNAQNSKDDA NAQNAQNDQN APNDANGQNV 720
  721 QIDRNDSNAQ NGQNAPNDQN AQNDPNAQNA PNVQNSQNTR NAQNSQNAQN ARNAPNAQIA 780
  781 QNDPNAPNAQ IAQNAPNAQN DINAPNVQNA QKAPNAQNAQ EQQEAQAKEL EKEIGQFLCK 840
  841 RSFGVLEGLM DLVGGFEKHT LDVSTLKTIK EKTNQYCDRV IDEENARECL NLAVKF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle